PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100158750081
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family AP2
Protein Properties Length: 191aa    MW: 21602.2 Da    PI: 9.8269
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100158750081genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-1686137155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  Ote100158750081|100158750081  86 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 137
                                   57****************988532...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003800.0062257IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-72353IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-72452IPR001471AP2/ERF domain
PROSITE profilePS510328.9392451IPR001471AP2/ERF domain
CDDcd000188.28E-1286145No hitNo description
SuperFamilySSF541711.44E-1886146IPR016177DNA-binding domain
PfamPF008475.2E-1186137IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-1987145IPR001471AP2/ERF domain
PROSITE profilePS5103219.20387145IPR001471AP2/ERF domain
SMARTSM003803.2E-3187151IPR001471AP2/ERF domain
PRINTSPR003674.6E-58899IPR001471AP2/ERF domain
PRINTSPR003674.6E-5127147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MNHGRVDVAE NVDNMLQFTL VSGYDKEDKA ARAYDLAALK YWGPTATTNF PISNYSKELE  60
EMKHMTKQEF IASLRRKSSG FSRGASIYRG VTRHHQQGRW QARIGRVAGN KDLYLGTFAT  120
EEEAAEAYDI AAIKFRGMNA VTNFEMNRYD VEAIAKSPLP IGGTAKKLKI SXXXXXXXXX  180
XXXXXXXXQQ H
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010254562.11e-91PREDICTED: AP2-like ethylene-responsive transcription factor AIL7 isoform X1
RefseqXP_010254563.11e-91PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 isoform X2
SwissprotQ6PQQ32e-88AIL5_ARATH; AP2-like ethylene-responsive transcription factor AIL5
TrEMBLB9SYF92e-91B9SYF9_RICCO; Transcription factor, putative
STRINGGLYMA18G29400.23e-90(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25802449